(Roughly) Daily

Posts Tagged ‘DNA’

“Geographers never get lost. They just do accidental field work.”*…

 

A Facebook friend recently noted that Turkey was “a remarkably rectangular country.” I wondered how it compared to other countries, and this post shows my answers (Turkey is 15th; Egypt is the most rectangular; full table below). I defined the rectangularness of a country as its maximum percentage overlap with a rectangle of the same area, working in the equirectangular projection (i.e., x = longitude, y = latitude). Ideally each country would get its own projection, but equirectangular rectangles feel at least linguistically thematic and are easier to code…

David Barry‘s ranking of “The rectangularness of countries.”

* Nicholas Chrisman, Professor of Geomatic Sciences, Université Laval

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As we get square, we might send paradigm-shaping birthday greetings to a woman who enabled mapping of an altogether different– and world-changing– sort: Rosalind Franklin; she was born on this date in 1920. A biophysicist and X-ray crystallographer, Franklin captured the X-ray diffraction images of DNA that were, in the words of Francis Crick, “the data we actually used” when he and James Watson developed their “double helix” hypothesis for the structure of DNA. Indeed, it was Franklin who argued to Crick and Watson that the backbones of the molecule had to be on the outside (something that neither they nor their competitor in the race to understand DNA, Linus Pauling, had understood).  Franklin never received the recognition she deserved for her independent work– her paper was published in Nature after Crick and Watson’s, which barely mentioned her– and she died of cancer four years before Crick, Watson, and their lab director Maurice Wilkins won the Nobel Prize for the discovery.

 source

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July 25, 2016 at 1:01 am

“The mind is a machine that is constantly asking: What would I prefer?”*…

 

As an increasing number of folks “modify” their bodies, hacking them to add (often electronic) enhancements, the Age of Radical Evolution is upon us…

Dallas is at the center of two movements that are each trying to bring implants to the mainstream. Tattoo artists and technophiles head one, and well-heeled university neurologists and medical device engineers form the vanguard of the other.

The fringe commercial types, who design and inject mail-order devices into their bodies, call themselves “grinders.” The high-end researchers, with advanced degrees and government contracts, call themselves “bioengineers.” They have radically different approaches, but they’re actually pulling humanity in the same direction — toward a fusion of hardware and wetware by incorporating technology into the body.

The prime driver of both of these movements is the shrinking size of wireless electronics. Implanted electronic devices are not new; surgeons in Sweden installed the first heart pacemakers in 1958 and researchers first implanted cochlear implants to mitigate hearing loss in the 1970s. But this is the iPhone generation, and electronics have grown small and powerful enough to appear in some unlikely places…

More at “Body hackers and bioengineers are trying to make DFW a hub of implantable electronics.”

* George Saunders, “Buddha Boy,” The Braindead Megaphone

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As we conspire in our futures, we might send bio-identifiable birthday greetings to Sir Alec John Jeffreys; he was born on this date in 1950.  A geneticist, Sir Alec discovered and developed the techniques of DNA fingerprinting and profiling, used for unique identification of humans, animals and other organisms from their DNA material.

 source

 

Written by (Roughly) Daily

January 9, 2016 at 1:01 am

“The reason some portraits don’t look true to life is that some people make no effort to resemble their pictures”*…

 

Dublin   MtDNA Haplogroup: H2a+152 (Likely ancestry 25% European)    SRY Gene: absent    Gender: Female     rs12913832: AG     Eye Color: 56% chance of brown eyes; 37% chance of green eyes; 7% chance of blue eyes.   rs4648379: CC     Typical nose size   rs6548238: CC     Typical odds for obesity

In Stranger Visions artist Heather Dewey-Hagborg creates portrait sculptures from analyses of genetic material collected in public places. Working with the traces strangers unwittingly leave behind, Dewey-Hagborg calls attention to the impulse toward genetic determinism and the potential for a culture of biological surveillance. Designed as an exploratory project based on emerging science, the forecast of Stranger Visions has proved prescient. For an example of DNA phenotyping at work in forensics check out the companies Parabon NanoLabs and Identitas and read about their collaboration with the Toronto police. Also see Mark Shriver’s research at Penn State on predicting faces from DNA…

New York City    MtDNA Haplogroup: L2a1 (Likely ancestry 25% African)    SRY Gene: present     Gender: Male    rs12913832:     AA Eye Color: Brown     rs4648379: CC     Typical nose size     rs6548238: CC     Typical odds for obesity

More at “Artist Recreates Strangers’ Faces From Discarded DNA.”

* Salvador Dalí

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As we strike a pose, we might send twisted birthday greetings to Francis Harry Compton Crick; he was born on this date in 1916.  A biochemist and biophysicist, Crick shared (with James Watson and Maurice Wilkins– but not, surely unjustly, with Rosalind Franklin) the 1962 Nobel Prize for Physiology or Medicine for the determination of the molecular structure of deoxyribonucleic acid (DNA), the chemical substance ultimately responsible for hereditary control of life functions– a cornerstone of genetics, widely regarded as one of the most important discoveries of 20th-century biology.

 source

 

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June 8, 2015 at 1:01 am

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“LOCK-AND-KEY, n. The distinguishing device of civilization and enlightenment”*…

 

The pursuit of lock picking is as old as the lock, which is itself as old as civilization. But in the entire history of the world, there was only one brief moment, lasting about 70 years, where you could put something under lock and key—a chest, a safe, your home—and have complete, unwavering certainty that no intruder could get to it.

This is a feeling that event security guard service experts call “perfect security.”

Since we lost perfect security in the 1850s, it has has remained elusive. Despite tremendous leaps forward in security technology, we have never been able to get perfect security back…

Joseph Bramah’s challenge lock: “The artist who can make an instrument that will pick or open this lock shall receive 200 Guineas the moment it is produced.” 200 Guineas in 1777 would be about £20,000 today. The challenge held until 1851.

From the late 1770s until the mid-19th century, two British locks– the Bramah and the Chubb– offered their users unpickable security.  Then, at A. C. Hobbs, an American locksmith, attended The Great Exhibition—the first international exhibition of manufactured products– and destroyed that sense of security forever…

 

The “unpickable” Chubb Detector Lock

Read the remarkable Roman Mars’ account of security (and the loss thereof) in “In 1851, A Man Picked Two Unpickable Locks and Changed Security Forever“; hear it on his wonderful podcast, 99% Invisible.

* Ambrose Bierce, The Devil’s Dictionary

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As we reach for our keys, we might recall that it was on this date in 1953 that a different kind of lock was picked: Nature published a one-page article by James Watson and Francis Crick outlining the structure of DNA– te work for which the pair won a Nobel Prize in 1962.  (Their paper ran immediately ahead of one co-authored by Maurice Wilkins, who shared the Nobel award, in the same issue.)

 source (and larger, legible version)

 

Written by (Roughly) Daily

April 25, 2015 at 1:01 am

Connections…

 

Everyone knows the old saw that “no technology exists in a vacuum.”  Less clear to our linear-narrative-obsessed culture is the fact that no technology was invented in one, either.  The strands that connect the dots of a technology’s path from invention to deployment to adoption criss and cross much more than we give them credit for, even in TED Talks.  History Mesh is an interactive timeline tracing the interconnected history of four technology megatrends over the past four millennia, using the London Tube Map as graphic inspiration.  Think the history of computation started in the 1950s and has nothing to do with “water puppet theater” in the third century B.C.E.?  Think again…

Read the whole story here, then explore History Mesh.

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As we appreciate the shoulders of those on whom we stand, we might send paradigm-shaping birthday greetings to Rosalind Franklin; she was born on this date in 1920.  A biophysicist and X-ray crystallographer, Franklin captured the X-ray diffraction images of DNA that were, in the words of Francis Crick, “the data we actually used” when he and James Watson developed their “double helix” hypothesis for the structure of DNA. Indeed, it was Franklin who argued to Crick and Watson that the backbones of the molecule had to be on the outside (something that neither they nor their competitor in the race to understand DNA, Linus Pauling, had understood).  Franklin never received the recognition she deserved for her independent work– her paper was published in Nature after Crick and Watson’s, which barely mentioned her– and she died of cancer four years before Crick, Watson, and their lab director Maurice Wilkins won the Nobel Prize for the discovery.

 source

Written by (Roughly) Daily

July 25, 2013 at 1:01 am